Index _ | C | E | F | G | L | P | R | S | T | W _ _eval() (in module simvi.model.simvi) _train() (in module simvi.model.simvi) C ContrastLinearProbing (class in pertvi.model.linearprob) E extract_edge_index() (in module simvi.model.simvi.SimVIModel) F forward() (pertvi.model.linearprob.ContrastLinearProbing method) (pertvi.model.linearprob.LinearProbing method) (pertvi.model.linearprob.WeightedDisentangledLinearProbing method) (pertvi.model.linearprob.WeightedLinearProbing method) G get_archetypes() (simvi.model.simvi.SimVIModel method) get_attention() (simvi.model.simvi.SimVIModel method) get_latent_representation() (scshift.scShift method) (simvi.model.simvi.SimVIModel method) get_pert() (scshift.scShift method) get_se() (simvi.model.simvi.SimVIModel method) L LinearProbing (class in pertvi.model.linearprob) LPModel (class in scshift) P PertVIModel (class in pertvi.model.pertvi) predict() (pertvi.model.linearprob.ContrastLinearProbing method) (pertvi.model.linearprob.LinearProbing method) (pertvi.model.linearprob.WeightedDisentangledLinearProbing method) (pertvi.model.linearprob.WeightedLinearProbing method) (scshift.LPModel method) R return_f_pv() (in module simvi.model.simvi) S scShift (in module scshift) setup_anndata() (scshift.scShift class method) (simvi.model.simvi.SimVIModel class method) SimVIModel (class in simvi.model.simvi) T train() (scshift.LPModel method) (scshift.scShift method) (simvi.model.simvi.SimVIModel method) W WeightedDisentangledLinearProbing (class in pertvi.model.linearprob) WeightedLinearProbing (class in pertvi.model.linearprob)